PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G367400.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 236aa    MW: 25960.5 Da    PI: 6.8005
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G367400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.81.5e-1179125554
                        HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        +  rE+ RRdr+N++f eL ++l +    + +K++Ka+iL  Av+ + +L
  Aqcoe1G367400.1.p  79 KACREKMRRDRLNERFLELGSILEPG---RPPKMDKAAILSDAVRMVTQL 125
                        678**********************8...89**************99988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.22474125IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.66E-878130No hitNo description
PfamPF000104.1E-978125IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.8E-1480150IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.4E-1080131IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.2E-1481147IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd146860.00563140172No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    Send to blast
MVSPENSNWL LDYGLIDEIS VPIAEFPTPV SAFQWSAQPL NTSGVSVEID SSFVDAEGLK  60
ETGSKKRGRS EACGASGSKA CREKMRRDRL NERFLELGSI LEPGRPPKMD KAAILSDAVR  120
MVTQLRSESQ KLKDSNEDLQ EKIKELKSEK NELRDEKQRL KAEKEKLEQQ VKAMSSQPSF  180
LPHPSAIPAA YAAHGQAPGN KLMPFVGYPG VAMWQFMPPA AVDTSQDHVL RPPVA*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010247015.11e-136PREDICTED: transcription factor ILR3-like
SwissprotQ9FH371e-106ILR3_ARATH; Transcription factor ILR3
TrEMBLF6HIM01e-133F6HIM0_VITVI; Putative uncharacterized protein
STRINGVIT_12s0059g02650.t011e-133(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-107bHLH family protein